BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031C06SP1|AL429362
(781 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1805 1425 0.0
3x_Contig30 107 4e-23
>3x_Contig1805
Length = 19369
Score = 1425 bits (706), Expect = 0.0
Identities = 746/774 (96%)
Strand = Plus / Minus
Query: 1 aagcaatttccagkctcaagacaaacggtccatcattcgaacttcagctctatatagttt 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2938 aagcaatttccaggctcaagacaaacggtccatcattcgaacttcagctctatatagttt 2879
Query: 61 catktgattgggaagagggtgtttctagtgaatagtttaagagagtacgaatctggaaca 120
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2878 catgggattgggaagagggtgtttctagtgaatagtttaagagagtacgaatctggaaca 2819
Query: 121 gtaacatcaaaacggtaagctcgcctggvaatatactacaggcgttttctttacgattcg 180
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 2818 gtaacatcaaaacggtaagctcgcctggaaatatactacaggcggtttctttacgattcg 2759
Query: 181 tgaaactgtctacgaactcagcgtttggtggctggttgaacagaaaammacaccgatagc 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2758 tgaaactgtctacgaactcagcgtttggtggctggttgaacagaaaaaaacaccgatagc 2699
Query: 241 ataatamcttagttgavaattgctttatcatcctaacgagtacctgamaatccaagaaaa 300
|||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2698 ataataacttagttgaaaattgctttatcatcctaacgagtacctgaaaatccaagaaaa 2639
Query: 301 gtagtaacaacctcatcattccttattccattcgcmatcataccattttgattttcaaga 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2638 gtagtaacaacctcatcattccttattccattcgcaatcataccattttgattttcaaga 2579
Query: 361 mtaavaaatacaaaatggacatgacggcccaagacgaaaaactggtccacgaggaacaag 420
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2578 ataaaaaatacaaaatggacatgacggcccaagacgaaaaactggtccacgaggaacaag 2519
Query: 421 tataacaatgttcaatagcmcttatttccttttcctgctagtaccaagttctcacatgaa 480
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2518 tataacaatgttcaatagcacttatttccttttcctgctagtaccaagttctcacatgaa 2459
Query: 481 gaccacagaacaatgctttactttvatgatcgabcttctacctaacatccatttttnatg 540
|||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||
Sbjct: 2458 gaccacagaacaatgctttactttaatgatcgatcttctacctaacatccatttttaatg 2399
Query: 541 gtcgtcagtggctgtttgtcacattattcgatggatcatgtgacttgaattaggcaagtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2398 gtcgtcagtggctgtttgtcacattattcgatggatcatgtgacttgaattaggcaagtg 2339
Query: 601 cttcttcaatcgttgaatcamatattgntgaggataagtggaccgagaacactatgtaaa 660
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 2338 cttcttcaatcgttgaatcaaatattgatgaggataagtggaccgagaacactatgtaaa 2279
Query: 661 ttgcccatcttaaggaactgtttktkaaktatkgcctcaccacctcttttaacaaaatkt 720
|||||||||||||||||||||| | || ||| ||||||||||||||||||||||||| |
Sbjct: 2278 ttgcccatcttaaggaactgttggtgaagtatggcctcaccacctcttttaacaaaatgt 2219
Query: 721 gtctcagtatgttgcctccacgtgttacattgttaaaactacttttgtacktga 774
||||||||| ||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 2218 gtctcagtaggttgcctccacgtgttacattgttaaaactactttggtacgtga 2165
>3x_Contig30
Length = 1128
Score = 107 bits (53), Expect = 4e-23
Identities = 112/133 (84%)
Strand = Plus / Minus
Query: 531 atttttnatggtcgtcagtggctgtttgtcacattattcgatggatcatgtgacttgaat 590
|||||| ||||| || ||||| ||||||| | |||||| ||||||| |||||| ||||||
Sbjct: 976 atttttaatggtagtaagtggatgtttgtaaaattattagatggataatgtgaattgaat 917
Query: 591 taggcaagtgcttcttcaatcgttgaatcamatattgntgaggataagtggaccgagaac 650
|||| ||||| || || ||| ||||||| | |||||| |||||||||||||| |||||
Sbjct: 916 taggaaagtgattattaaatagttgaataaaatattgatgaggataagtggaaagagaaa 857
Query: 651 actatgtaaattg 663
| |||||||||||
Sbjct: 856 aatatgtaaattg 844
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.33
Gapped
Lambda K H
1.40 0.714 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3784
Number of Sequences: 1807
Number of extensions: 3784
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 2
length of query: 781
length of database: 10,358,551
effective HSP length: 16
effective length of query: 765
effective length of database: 10,329,639
effective search space: 7902173835
effective search space used: 7902173835
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.4 bits)